It is always good accounting practice to reconcile Card Payments being received in to your Merchant/Bank Account with your source transactions.
Card Payment Report
Spoonfed provides a report to help you with this task - see Reports > Card Payments.
Only Orders with a Payment Method of 'Card' (or your gateway provider) will be included on this report.
Run this report for the date range you want to see what payments have been made against each Order.
The Report will show all the payments and refunds made for each individual Order - it will also tell you whether the payment was a Customer Online payment (in which case the payment transaction reference from your Payment Gateway provider will be included) or a 'manual' payment via a virtual terminal or POS - see here for further info.
You will then be able to reconcile all Spoonfed Orders paid by Card with your Merchant/Bank Account.